Tag: NGS bioinformatics
RNA-seq data analysis: from raw reads to differentially expressed genes
Training Material – Posted by Eija Korpelainen on December 4, 2015
This course material introduces the central concepts, analysis steps and file formats in RNA-seq data analysis. It covers the analysis from quality control to d…
TGAC_SeqAhead: NGS current challenges and data analysis for plant researchers
Training Material – Posted by Maria Victoria Schneider on June 22, 2015
Hands on course held at TGAC (http://www.tgac.ac.uk/) on Monday 19 to Friday 23 May 2014 What is this workshop about? The course will combine lectures and led d…
SV-Autopilot: the new face of Structural Variant Detection
Training Material – Posted by Gregoire Rossier on September 10, 2014
Although there are many tools designed for structural variation (SV) analysis there has been no bench mark study to guide scientists in choosing the best tool f…
3-day hands-on NGS workshop
Training Material – Posted by Annette McGrath on January 17, 2014
This document is the trainee exercise booklet for a 3 day hands-on Next Generation Sequencing workshop developed by Bioplatforms Australia, CSIRO and EMBL-EBI….
Quality Control of Illumina Sequencing data in the cloud
Training Material – Posted by Mick Watson on January 13, 2014
This course was created as part of the SeqAhead project and contains both powerpoint presentations and course materials that teach students how to set up an Ama…
Next Generation Sequencing (NGS) wikibook
Training Material – Posted by Maria Victoria Schneider on July 15, 2013
Next generation sequencing (NGS) has become a commodity. With the commercialization of various affordable desktop sequencers, NGS will be of reach by more tradi…