Tag: Plotting data
Working with Affymetrix CEL files in R
Training Material – Posted by Mick Watson on January 14, 2014
This tutorial shows how to download some public Affymetrix microarray data, load the data into R, calculate expression values and do some very simple plotting
Simple plotting in R
Training Material – Posted by Mick Watson on January 14, 2014
This quick and simple tutorial demonstrates some of the easy plotting tools in the R core software. the data are in the "data" directory and come from…
Quality Control of Illumina Sequencing data in the cloud
Training Material – Posted by Mick Watson on January 13, 2014
This course was created as part of the SeqAhead project and contains both powerpoint presentations and course materials that teach students how to set up an Ama…
Introduction to Biopython
Training Material – Posted by allegra.via Via on November 4, 2013
This is a module from the "Python for Biologists" course. The module presents an introduction to Biopython. It shows how to deal with sequences and se…
Bioinformatics for Mass spectrometry analysis
Training Material – Posted by Patricia Palagi on October 30, 2013
This tutorial on Bioinformatics for Mass spectrometry analysis was part of a full series of tutorials that I have organised in 2009 while sitting in the Educati…
Linear Motifs and Phosphorylation Sites
Training Material – Posted by allegra.via Via on July 16, 2013
This is a lecture on linear motifs and phophorylation sites (P-sites). Some materials from other lectures are reused. The lecture is basically about computation…
Next Generation Sequencing (NGS) wikibook
Training Material – Posted by Maria Victoria Schneider on July 15, 2013
Next generation sequencing (NGS) has become a commodity. With the commercialization of various affordable desktop sequencers, NGS will be of reach by more tradi…
BioJS
Training Material – Posted by Rafael C Jimenez on July 11, 2013
BioJS is a library of graphical components easy to reuse to represent biological information
Bioinformatics for MS analysis
Training Material – Posted by Patricia Palagi on July 5, 2013
The purpose of this course is to teach students the fundamental concepts underlying the analysis of proteins using mass spectrometry.
Parsing data records using Python programming
Training Material – Posted by allegra.via Via on July 5, 2013
This is a module from the "Python for Biologists" course. One typical problem in bioinformatics is parsing data files. This module explains how t…