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Flow Cytometry 2013 Module 2 – Exploring FCM data in R

  • Loading a single or groups of FCS fi les into R
  • flowFrame and flowSet objects and their attributes
  • Exploring sample annotation and keywords stored within the FCS fi le format, searching for speci c samples (such as controls) using grep, highlighting the importance of correct sample annotation at point of acquisition
  • Simple dot plots and density plots